Install UCNEbase database in the container

docker/Dockerfile

@@ -22,33 +22,40 @@ LABEL org.opencontainers.image.created=$BUILD_DATE
 
 
 # INSTALLATION
-ENV USER=ucnebase
+#ENV USER=ucnebase
 # In a single layer to save time AND space
 RUN echo '# OS update' \
 	&& export DEBIAN_FRONTEND=noninteractive \
 	&& apt-get update  -y \
 	&&        echo '# Install OS requirements' \
 	&& apt-get install -y --no-install-recommends perl libcgi-pm-perl postfix wget git mysql-server apache2 ca-certificates php-mysqlnd \
-	&& echo 'perl perl-CGI httpd postfix rsyslog-mysql wget git php-mysqlnd' \
 	&&        echo '# Install UCNEbase' \
 	&& cd /usr/local/ \
 	&& git clone https://gitlab.sib.swiss/EPD/UCNEbase_web.git UCNEbase_web.git \
 	&& cd UCNEbase_web.git/ \
 	&& rm -Rf OLD/ .git* docker/ \
+	&&        echo '# Install UCNEbase database' \
+	&& service mysql start \
+	&& mysql -u root -e 'CREATE DATABASE `UGRB`' \
+	&& mysql -u root -e "CREATE USER 'epd'@'localhost' IDENTIFIED BY 'Xaga8]aYulgx+6'" \
+	&& mysql -u root -e 'GRANT SELECT ON `UGRB`.* TO `epd`@`localhost`' \
+	&& gunzip -c /usr/local/UCNEbase_web.git/htdocs/data/download/mysql_data/UCNEbase_v_2_0.sql.gz >/tmp/UCNEbase_v_2_0.sql \
+	&& mysql -u root UGRB </tmp/UCNEbase_v_2_0.sql \
+	&& rm -f /tmp/UCNEbase_v_2_0.sql \
 	&&        echo '# CLEANING' \
 	&& echo '## So try to remove manually useless stuff' \
 	&& apt remove -y *-dev wget cmake make swig autoconf check gcc g++ gfortran python3* patchelf \
 	&& apt autoremove -y \
 	&& apt-get clean \
-	&& rm -rf /var/lib/apt/lists/* \
-	&& groupadd -g 1001 ${USER} && useradd -r -u 1001 -g ${USER} ${USER}
+	&& rm -rf /var/lib/apt/lists/*
+#	&& groupadd -g 1001 ${USER} && useradd -r -u 1001 -g ${USER} ${USER}
 
 
 # SECURITY
 ## Control root access
-USER ${USER}
-ENV HOME=/home/${USER}
-WORKDIR ${HOME}
+#USER ${USER}
+#ENV HOME=/home/${USER}
+#WORKDIR ${HOME}
 ##Rest of Dockerfile with this user
 ENV LC_ALL="C"