1. 18 Dec, 2017 1 commit
    • Andres's avatar
      Tree annotation update: · 87ce7024
      Andres authored
      * fixed tree coloring bugs
      * tree branch/node/leafname coloring newick tags: C / BC = red / rgb(255,0,0) / 255.0.0 / #ff000
      * global tree settings: custom metadata tag for leaf or node label, node spot size
      * node-specific newick tags for overriding global settings: NL= S / GN / NHXtag (node/leaf label) CR=3/4/5... (node spot size)
      87ce7024
  2. 12 Dec, 2017 1 commit
    • Andres's avatar
      Maintenance update: · 68881285
      Andres authored
      * Added CORS and JSONP support for serverless cross-origin data import
      * Better metadadata parsing from NHX trees (add custom tags via NewickMeta dictionary)
      * Custom tree node and branch colors (PhyloXML "color" or NHX "C" and "BC" tags)
      * Updated jQuery libraries
      68881285
  3. 27 Nov, 2017 2 commits
  4. 22 Nov, 2017 1 commit
    • Andres's avatar
      Bug fixes and small improvements: · 35e3e5a9
      Andres authored
      * Fixed: No link between tree and alignment if fasta header contains id and description (issue #1)
      * Fixed: index.html file as an HTML attribute type (issue #2)
      * Fixed: Load tree and msa files from 2 urls at the same time fails (issue #4)
      * Fixed issues with tree rendering (branchlength overflow, 0-length branches, name tag positioning, metadata Ensembl links)
      * Wasabi server: better handling of corrupt/missing metadata in analysis library
      35e3e5a9
  5. 07 Sep, 2016 1 commit
  6. 06 Sep, 2016 1 commit
  7. 05 May, 2016 1 commit
  8. 14 Jan, 2016 1 commit
  9. 18 Dec, 2015 4 commits
  10. 22 Nov, 2015 1 commit
  11. 19 Nov, 2015 1 commit
  12. 17 Nov, 2015 1 commit
  13. 13 Nov, 2015 1 commit
    • Andres's avatar
      * Bug fixes (user accounts). · 40f79e5d
      Andres authored
      * NEXUS file import and export (supports "trees", "matrix" and "translate" commands);
      * import files without wasabi server (also with URL parameters "url=" or "file= ").
      * Leaf color support (with newick tag "[&&NHX:C=color]" or PhyloXML "color" attribute)
      40f79e5d
  14. 02 Nov, 2015 1 commit
  15. 01 Nov, 2015 1 commit
  16. 27 Oct, 2015 1 commit
  17. 10 Sep, 2015 1 commit
  18. 04 Sep, 2015 1 commit
    • Andres's avatar
      Compound update: · 2b9d7974
      Andres authored
      * Bug fixes. This is stable version with no known issues.
      * New: plugin system. Pagan support reimplemented using plugin API (new interface, with placement mode).
      * Anlaysis library updates: Create and share collections. Path view. Add metadata.
      * Save dialog: store coloring/scroll position state
      * Option for creating a temporary user account
      * Smaller modifications (new "update alignment" notification etc.)
      2b9d7974
  19. 22 Oct, 2014 1 commit
  20. 19 Jun, 2014 1 commit
  21. 27 Mar, 2014 1 commit
  22. 26 Feb, 2014 1 commit
  23. 22 Feb, 2014 1 commit
    • Andres's avatar
      Server side: · 1a133b7c
      Andres authored
      * Library ID tracking moved to indexing (+duplicate check)
      * Can create empty library folders
      * Can share whole analysis folders (+move/copy/delete) + UI side
      * Can copy/move analyses in library
      Javascript: bug fixes
      * user creation, analysis (auto)save target
      1a133b7c
  24. 09 Dec, 2013 1 commit