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Web site for scratch programming event at Open Geneva (14 April 2018) v2017: Web site for 2 SIB tracks at Open Geneva Hackathons (13/14 May 2017)

A RESTFul web app in PHP / Angular that handles user accounts, groups, projects and experiments. Files can be uploaded in experiments. Download requests is also implemented.

This is the backend part implemented in SLIM / PHP

FastEpistasis, a software tool capable of computing tests of epistasis for a large number of SNP pairs, is an efficient parallel extension to the PLINK epistasis module.

Angular part of the public interface

An R package implementing the Abnormal Blood Profile Score

An attempt to package the smrtlink tools into a singularity image, based on CentOS7

game

modules to visualize data

Angular Front-end and R scripts of A parallel coordinates plots using RServe and d3js v.4