Use MKL VML functions
Better log messages formatting
Changed access method to children
New implementation of the 'same tree' flag
Fixed MKL directory and compilation line
Removed alignment for PGI compiler
Set slot (matrix and vector) length by experiment
Removed inline keywords
Added explicit to constructors
Aligned eigen decomposed matrices
Removed reversing of mD
Using STL map to convert codons to numbers
Reordered access to big vectors



git-svn-id: https://svn.vital-it.ch/svn/hp2c/trunk/Codeml_Variants/Fastcodeml@2872 95c5a404-1f88-0410-a6b0-c3f062b6f34a