... | ... | @@ -8,5 +8,7 @@ FastEpistasis optimizes the computations by splitting the analysis tasks into th |
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As of version 2.03, FastEpistasis will also test epistatic effects for binary traits using logistic regression model similar to PLINK.
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As of version 2.05, preFastEpistasis automatocally uses all to all snps interactions when no set file is provided. Furthermore, genetic data can now be stored in 2bit format such as in Plink, rather than 1 byte. This is triggered by at compile time. We now provide two tools: one to test performance of the QR algorithm based upon the chosen method and another to have quick access to a snp A -snp B epistatic interaction results given snps A and B.
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## Download
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## Reference
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***FastEpistasis: A high performance computing solution for quantitative trait epistasis.*** Schuepbach T, Xenarios I, Bergmann S, Kapur K . Bioinformatics. 2010 Apr 7 |
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