Fix paths

htdocs/epdnew/documents/Dm_epdnew_005_pipeline.php

@@ -446,10 +446,10 @@ Experimental data:
   The quality of each sample-specific promoter colection was based on
   the density distribution of known core promoter elements at
   the expected positions. A <a
-  href='/promoter_elements/tata_old.php'>
+  href='/epd/promoter_elements/tata_old.php'>
   TATA-box</a> score was evaluated as the density distribution of the
   lement at position -29 from the TSS and an <a
-  href='/promoter_elements/init.php'>
+  href='/epd/promoter_elements/init.php'>
   Initiator</a> score as the density disribution at the TSS. Samples
   with very low scores (outliers) were discarded from the pool.
 </p>

htdocs/epdnew/documents/Hs_epdnew_005_pipeline.php

@@ -281,9 +281,9 @@ Experimental data:
     tested to exclude low quality samples from the final
     collection. To achive this, each promoter collection was scored
     according to the distribution of the <a
-    href='/promoter_elements/tata_old.php'>TATA-box</a>
+    href='/epd/promoter_elements/tata_old.php'>TATA-box</a>
     and <a
-    href='/promoter_elements/init.php'>Inr</a>
+    href='/epd/promoter_elements/init.php'>Inr</a>
     motif in the expected position (-29bp from the TSS and at the TSS
     respectively). Samples with very low motif frequencies (Inr
     frequency < 10% and TATA-box < 5%) were discarded (9 samples in

htdocs/epdnew/documents/Rm_epdnew_001_pipeline.php

@@ -100,7 +100,7 @@ Experimental data:
     </td>
     <td class='document'>
       <a target='_blank' href='https://www.ncbi.nlm.nih.gov/pubmed/29087374'>
-      </a>
+      29087374</a>
     </td>
     <td class='document' width='40'>
       <a target='_blank'