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- COPYING 674 additions, 0 deletionsCOPYING
- INSTALL 27 additions, 0 deletionsINSTALL
- Makefile 76 additions, 0 deletionsMakefile
- README.txt 175 additions, 0 deletionsREADME.txt
- bowtie2bed.c 523 additions, 0 deletionsbowtie2bed.c
- debug.h 18 additions, 0 deletionsdebug.h
- errors.c 264 additions, 0 deletionserrors.c
- errors.h 44 additions, 0 deletionserrors.h
- examples/README.html 369 additions, 0 deletionsexamples/README.html
- examples/README.txt 280 additions, 0 deletionsexamples/README.txt
- examples/chen10_ctcf.mat 19 additions, 0 deletionsexamples/chen10_ctcf.mat
- examples/chr_hdr 0 additions, 0 deletionsexamples/chr_hdr
- examples/genomes_chr_NC_gi.tar.gz 0 additions, 0 deletionsexamples/genomes_chr_NC_gi.tar.gz
- examples/genomes_chr_hdr.tar.gz 0 additions, 0 deletionsexamples/genomes_chr_hdr.tar.gz
- examples/results/chen10_ctcf_co1127_bowtie.bed 0 additions, 0 deletionsexamples/results/chen10_ctcf_co1127_bowtie.bed
- examples/results/chen10_ctcf_co1127_bowtie.out 0 additions, 0 deletionsexamples/results/chen10_ctcf_co1127_bowtie.out
- examples/results/chen10_ctcf_co1127_matrix_scan.bed 0 additions, 0 deletionsexamples/results/chen10_ctcf_co1127_matrix_scan.bed
- examples/results/chen10_ctcf_co1127_matrix_scan.out 0 additions, 0 deletionsexamples/results/chen10_ctcf_co1127_matrix_scan.out
- filterOverlaps.c 401 additions, 0 deletionsfilterOverlaps.c
- hash.h 15 additions, 0 deletionshash.h
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