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Created with Raphaël 2.2.09Apr15Mar10Aug9812Jul23Mar221698116Feb1514987219Jan12111054328Sep724Aug21Jul20131228Jun2115982126May423Feb1510919Jan13431Dec3024Nov23171611926Oct201914136530Sep29159124Aug27Jul826May2512115428Apr20726Nov2529Oct1472125Sep23Jul116Mar5414Feb15Jan981May27Nov9Oct26Sep7Apr27Feb242030Jan2312Dec23Nov213Oct27Jun2025Apr187Mar29Feb159812Jan5Oct24Sep4Aug328Jul22211317Jun15928May2726191812116522Apr212014138731Mar30251611104224Feb2317912Jan515Dec824Nov18171220Oct15141398723Sep25Aug6511Jul130Jun16227May5229Apr28221514810Mar25Feb1714125329Jan212015141387628Dec17169426Nov25181513121154230Oct2928232221171615141311987Merge branch 'develop'mastermasterFix weird characters in NHX tagsv7 developv7 developFix for gene name like "XB5813854 [provisional:ankrd52]"Add TODOAdd TODOFixes for gene names like "XB5813854 [provisional:ankrd52]"Improve find broken GN scriptUpdate NHX trees in the db based on fixed NHX filesMerge branch 'develop' of https://gitlab.sib.swiss/Selectome/pipeline into developAdd ROOT ND infoAdd a script to update the gene selected field missed because of Ensembl API errors and MGP_ idsUpdate for new field requirementsWIPFix version field size in tools tableAdd Gamma rate option for godon M8 testsFix few issues to run godon M8 testsAdd godon M8 testUpdate node2gene table from the fixed NHX filesSkip prots and branches already in node2geneCleaningAdd pseudo-root checksStart update_node2gene_from_NHX_files.pl + New datasets for get_selection_from_gene_listCleaningSimplify code + Set is_root=1 hereCleaningStart script to update the NHX trees in db and in /var/SELECTOME/Add timema example db nameAvoid id without trees (e.g. warnings)Fix path for TimemaAdd protein leaf label when noneFix warningsAdd insertionsGet missing fieldsGet deprecated gene missing infoStrat using Ensembl Perl API to get deprecated gene infoStart script to add missing (mostly deprecated) genesRemove empty GN (also for display)Fix /var/SELECTOME path for Euteleostomi + Disconnect properly from dbFix own Perl lib pathFix own Perl lib path