The sources are avalaible [here](https://github.com/badozor/mgmtstp27/tree/master/trunk/Rpackage). The R function MGMTpredict directly provides prediction, classification and confidence intervals as illustrated below:
The sources are avalaible [here](https://github.com/badozor/mgmtstp27/tree/master/trunk/Rpackage).
## Examples ##
The R function MGMTpredict directly provides prediction, classification and confidence intervals as illustrated below:
Additional documentation is avaialble [here](https://github.com/badozor/mgmtstp27/tree/master/trunk/Rdoc):
Additional documentations are avaialble [here](https://github.com/badozor/mgmtstp27/tree/master/trunk/Rdoc):
* Introduction to R package mgmtstp27 (version 0.1, in preparation, intromgmtstp27.pdf)
* Effect of normalization on the prediction of DNA methylation status of MGMT promoter: example with HM-450K Infinium data from TCGA and the R package mgmtstp27 (version 0.1, in preparation, docmgmtstp27.pdf)
* Prediction of the DNA methylation of MGMT with raw data (format IDAT) from HM-27k (version 0.1, in preparation, MgmtPredTCGA.pdf)