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  • eb2753fd33c5f4d39a76a4598cd7c7d652c0c6dd
  • master default protected
  • ProtoGene_3.4.4
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Created with Raphaël 2.2.017Nov17Jul12Apr18Oct1Jun14Dec730Nov13Jun30Mar233Nov27Oct20Sep159818Aug1130Jun26May15Apr21Jan19Nov15Oct6Aug21May23Apr16926Feb522Oct13Jun26May27Mar20Dec28Nov24Oct14Aug9831Jul26251127Jun2May11Apr14Feb31Jan13Dec629Nov19Oct20Sep5Jul21Jun15Mar99Feb9Jan15Dec817Nov20Oct729Sep15818Aug13117130Jul287216Jun929May2815717Apr1073231Mar302411Jan29Oct23Sep12Aug529Jul29Jun27May201222Apr8125Mar1826Feb251828Jan2Dec26Nov522Oct157124Sep171421Aug13653Jul225Jun191211428May16Apr26Mar1226Feb522Jan74Dec27Nov2014Aug31Jul326Jun191230May2215824Apr231210327Mar2019148Jan17Dec28Nov272119141312130Oct10510Sep27Aug30Jul245Put ProtoGene.pl in bin/mastermasterChange cache pathAdd other taxonomic exceptionsAdd taxonomic exceptionsSince centos7 update --exhaustive option looks to turn into an infinite loopNew taxon exceptionUse new NCBI eutilsAPIKeyAdd taxa exceptionAdd taxonomy exceptionAdd taxonomic exceptionAdd taxonomy exceptionAdd taxonomic exceptionUse FindBinUpdate history and add licenseMove lib and utils in subdirFix for new NCBI raw/Text format (they moved back!)Better rendering for ncbi acc.version id + Better stdout rendering + Update ncbi prot/nt links + Fix revtrans for the tcoffee serverStart to use new NCBI GI format + eutils https + Start new cache mecanism + CleaningFix for new NCBI BLAST raw format without GI and some other stuffsAdd taxonomic restrictionAdd taxonomy exceptionUse https for NCBI blast queriesAdd Taxonomic exceptionsAdd taxonomic restrictionsAdd taxonomic exceptionAdd taxonomic exclusionTaxonomyAdd taxonomic exceptionsAdd taxonNew taxonomic exceptionsAdd taxonomic exceptionsVersion compliant with ProtoGene RPM 4.2.0 and its manually edited files in /softwareFixes for blast db name change at IGS