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Fix SunStudio compiler warnings
Mainly unreachable code, a couple of integer issues and anonymous unions. Suppressed an anonymous union warning in cram_codecs.h as it would need a lot of changes to fix. A bogus 'end of loop not reached' error is suppressed in knetfile.c (the compiler does not like macros of the form `do { return; } while (0)`). Replaced use of `diff -q` with `cmp` in test.pl as the -q option is not supported in Solaris-derivatives.
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- bgzf.c 0 additions, 1 deletionbgzf.c
- cram/cram_codecs.h 6 additions, 0 deletionscram/cram_codecs.h
- cram/cram_encode.c 5 additions, 5 deletionscram/cram_encode.c
- cram/cram_external.c 2 additions, 2 deletionscram/cram_external.c
- cram/cram_structs.h 61 additions, 63 deletionscram/cram_structs.h
- hfile_libcurl.c 1 addition, 1 deletionhfile_libcurl.c
- knetfile.c 6 additions, 0 deletionsknetfile.c
- sam.c 6 additions, 3 deletionssam.c
- synced_bcf_reader.c 10 additions, 10 deletionssynced_bcf_reader.c
- tabix.c 0 additions, 1 deletiontabix.c
- test/test.pl 2 additions, 2 deletionstest/test.pl
- thread_pool.c 0 additions, 2 deletionsthread_pool.c
- vcf.c 8 additions, 7 deletionsvcf.c
- vcfutils.c 3 additions, 3 deletionsvcfutils.c
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