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Michael Baudis
ga4gh-arraymap
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Created with Raphaël 2.2.0
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default genome change to 36
master
master
New example query
Beacon v0.4
Beacon v0.4
Added the length to DEL or DUP as agreed for Beacon v0.4
Do not allow minLength and maxLength to be compliant with 0.3
Latest implementation of Beacon 0.3 + handling of datasets
Moved the check of Alternate bases to the checkPreconditions function
Implementing latest changes in the API spec
adding back genome HG 36
adding git ignore
Added suggestions from Michael
Remove GRCh36 for now, because the assembly does not seems to be in the MongoDB
Fixed tests for length and maxLength
Handle max length
Handle case where no result + use SEGSIZE instead of SEGSTOP when length is provided
Starting with Michael's comments
Merge branch 'master' of gitlab.isb-sib.ch:ST/ga4gh-arraymap
Beacon v0.3 compliance: Length for DEL only
Updated parameter descriptions (required: y/n)
Updated the parameter names
Fixed bug with empty length param
Added an optinal length field (not handled for now) + Response in case of not supported variant class (exists: false, note: 'Not supported' instead of an error)
Added example query
Updated default params in the form
Replaced variantClass by alternateBases + Beacon v0.3 as a default + handle all datasets + all datasets as default
Added mention to Beacon v0.3 to the home page
Beacon version 0.3: Handling of datasetIds
First attempt to implement Beacon version 0.3 Updated query parameters (Caution: datasetIds + referenceBase + alternateBase still missing)
Updated param names + Removal of DataUseConscent
adding yaml
adding beacon v3
approved info/variants
Added a link.
Update CIPOS/CIEND doc
Merge branch 'master' of https://gitlab.isb-sib.ch/ST/ga4gh-arraymap
adding new info
test if docu update works
adding reference genome on doc
updating doc
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