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5dc4c022

Commit 5dc4c022 authored Sep 25, 2012 by mvalle

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Fixed various doxygen comments and the Doxyfile parameters to comment all parts of the code

Added write results into file for database loading
Fixed various MPI problems

git-svn-id: https://svn.vital-it.ch/svn/hp2c/trunk/Codeml_Variants/Fastcodeml@4737 95c5a404-1f88-0410-a6b0-c3f062b6f34a

parent 171ed09f

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Changes 16

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AlignedAllocator.h 6 additions, 2 deletions

AlignedAllocator.h
BayesTest.h 10 additions, 9 deletions

BayesTest.h
BranchSiteModel.h 1 addition, 2 deletions

BranchSiteModel.h
CmdLine.h 1 addition, 2 deletions

CmdLine.h
Doxyfile 1 addition, 1 deletion

Doxyfile
Exceptions.h 3 additions, 1 deletion

Exceptions.h
Forest.h 39 additions, 20 deletions

Forest.h
ForestExport.h 3 additions, 3 deletions

ForestExport.h
ForestNode.h 17 additions, 17 deletions

ForestNode.h
HighLevelCoordinator.cpp 42 additions, 19 deletions

HighLevelCoordinator.cpp
HighLevelCoordinator.h 11 additions, 10 deletions

HighLevelCoordinator.h
ParseParameters.h 3 additions, 3 deletions

ParseParameters.h
PhyloTree.h 5 additions, 5 deletions

PhyloTree.h
WriteResults.cpp 106 additions, 6 deletions

WriteResults.cpp
WriteResults.h 32 additions, 4 deletions

WriteResults.h
fast.cpp 23 additions, 2 deletions

fast.cpp

with 303 additions and 106 deletions

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