GitLab

Optimization strategies for fast detection of positive selection on phylogenetic trees

various scripting tools

Get Bioconductor or CRAN R package information and produce an RPM spec file.

Angular part of the public interface

A RESTFul web app in PHP / Angular that handles user accounts, groups, projects and experiments. Files can be uploaded in experiments. Download requests is also implemented.

This is the backend part implemented in SLIM / PHP

A RESTFul web app in PHP / Angular that handles user accounts, groups, projects and experiments. Files can be uploaded in experiments. Download requests is also implemented. This is the frontend part implemented in angular / restangular.

Beacon implementation on top of arraymap.org

A basic git workshop.

uploader part of Jenkins Selenium tests

modules to visualize data

FastEpistasis, a software tool capable of computing tests of epistasis for a large number of SNP pairs, is an efficient parallel extension to the PLINK epistasis module.